General Information of MET (ID: META00939)
Name Platelet-activating factor
Synonyms   Click to Show/Hide Synonyms of This Metabolite
(R)-7-(Acetyloxy)-4-hydroxy-N,N,N-trimethyl-3,5,9-trioxa-4-phosphapentacosan-1-aminium hydroxide inner salt 4-oxide; 1 Alkyl 2 acetyl sn glycerophosphocholine; 1-Alkyl-2-acetyl-sn-glycerophosphocholine; 1-Hexadecyl-2-acetyl-GPC; 1-Hexadecyl-2-acetyl-glycero-3-phosphocholine; 1-Hexadecyl-2-acetyl-glycerophosphocholine; 1-Hexadecyl-2-acetyl-sn-glycero-3-phosphocholine; 1-Hexadecyl-2-acetyl-sn-glycero-phosphatidylcholine; 1-O-Hexadecyl paf; 1-O-Hexadecyl-2-O-acetyl-sn-glycero-3-phosophocholine; 1-O-Hexadecyl-2-O-acetyl-sn-glycero-3-phosphocholine; 1-O-Hexadecyl-2-O-acetyl-sn-glyceryl-3-phosphorylcholine; 1-O-Hexadecyl-2-acetyl-sn-glycero-3-phosphocholine; 1-O-Hexadecyl-2-acetyl-sn-glycerophosphocholine; 1-O-Hexadecyl-2-acetyl-sn-glyceryl-3-phosphorylcholine; 1-O-Hexadecyl-platelet-activating factor; AGEPC; APRL; Acetyl glyceryl ether phosphorylcholine; Acetyl-glyceryl-ether-phosphorylcholine; Aggregating factor, platelet; Antihypertensive polar renomedullary lipid; Blood platelet-activating factor; Blood platelet-activating factor acether; C16 PAF; C16-PAF; C16-PAF acether; C16:0 PAF; Factor, platelet activating; GPC(16:0/2:0); GPC(18:0); GPC(O-16:0/2:0); GPCho(16:0/2:0); GPCho(18:0); GPCho(O-16:0/2:0); HAG-PC; HAGPC; HD-PAF; Hexadecyl-paf-acether; PAF; PAF 16; PAF C 16; PAF acether; PAF-16 CPD; PAF-acether; PC(16:0/2:0); PC(18:0); PC(O-16:0/2:0); Phosphatidylcholine(16:0/2:0); Phosphatidylcholine(18:0); Phosphatidylcholine(O-16:0/2:0); Phosphorylcholine, acetyl glyceryl ether; Platelet activating factor; Platelet activating substance; Platelet aggregating factor; Platelet aggregation enhancing factor; Platelet-activating factor; Platelet-activating factor (1-O-hexadecyl); Platelet-activating factor C16; Platelet-activating factor acether; Platelet-activating substance; Thrombocyte aggregating activity
Source Aliphatic acyclic compounds
Structure Type   Glycerophosphocholines  (Click to Show/Hide the Complete Structure Type Hierarchy)
Lipids and lipid-like molecules
Glycerophospholipids
Glycerophosphocholines
PubChem CID
108156
HMDB ID
HMDB0062195
Formula
C26H54NO7P
Structure
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3D MOL is unavailable 2D MOL
  Click to Show/Hide the Molecular/Functional Data (External Links/Property/Function) of This Metabolite
DrugBank ID
DB02261
ChEBI ID
44811
ChemSpider ID
97241
Physicochemical Properties Molecular Weight 523.7 Topological Polar Surface Area 94.1
XlogP 6.5 Complexity 546
Heavy Atom Count 35 Rotatable Bond Count 26
Hydrogen Bond Donor Count N.A. Hydrogen Bond Acceptor Count 7
Function
Platelet-activating factor, also known as PAF and PC(O-16:0/2:0), is a ubiquitous, potent phospholipid activator and mediator of inflammation that has an important role in the pathogenesis of inflammatory disorders and cardiovascular disease. PAF is able to cause platelet aggregation and anaphylaxis. PAF is synthesized continuously in low quantities in many different types of cells, but especially those involved in host defence, such as macrophages, monocytes, granulocytes, neutrophils, platelets, and endothelial cells. Platelet-activating factor receptor (PAFR) is a G-protein coupled receptor (GPCR) located on the cell membranes of a variety of cells. Once bound to its receptor, PAF mobilizes calcium and activates a wide range of signalling pathways (e.g. phospholipase C-mediated signalling.
Regulatory Network
Full List of Protein(s) Regulating This Metabolite
      Pore-forming PNC peptide (PNC)
            Cellular tumor antigen p53 (TP53) Click to Show/Hide the Full List of Regulating Pair(s):   1 Pair(s)
               Detailed Information Protein   Info click to show the details of this protein
               Regulating Pair Experim Info click to show the details of experiment for validating this pair [1]
                      Introduced Variation Knockout of TP53
                      Induced Change Platelet-activating factor concentration: decrease (Log2 FC=0.33)
                      Summary Introduced Variation         Induced Change 
                      Disease Status Colon cancer [ICD-11: 2B90]
                      Details It is reported that knockout of TP53 leads to the decrease of platelet-activating factor levels compared with control group.
References
1 Integrative omics analysis of p53-dependent regulation of metabolism. FEBS Lett. 2018 Feb;592(3):380-393.

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